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g) Succinate dehydrogenase (ubiquinone) Succinate dehydrogenase Dihydrolipoyl dehydrogenase Dihydrolipoyllysine-residue acetyltransferase Dihydrolipoyllysine-residue succinyltransferase Citrate (Si)-synthase ATP citrate synthase Phosphoenolpyruvate carboxykinase (GTP) Citrate (pro-3S)-lyase Fumarate hydratase Aconitate hydratase Succinate oA ligase (GDP-forming) Succinate oA ligase (ADP-forming)
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n this pipeline, potential chimeras were removed using Chimera Slayer (command chimera.slayer) with default parameters [25]. Pipeline 3. Instead of chimera removal using UCHIME, sequences were compared with the Greengenes reference database pre-clustered at 97 identity (Greengenes file gg_97_otus_4feb2011.fasta) [19] using BLASTN (-evalue 1e-050 -perc_identity 97 -max_target_seqs 1) [26]. Minimu

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